No. words: 1143; after pruning: 1103


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:516)  492  1.16 0.00 0.00  MoSU034F_A11_BG274853Tu01P019H01P019H071F1_095.ab1        1   517 (55)  C MoSU034R_A11_BG274853Tu01P019H01P019H071R1_095.ab1   (54)   517     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C MoSU034R_A11_BG274853Tu01P019H01P019H071R1_095.ab1   571 
   63    MoSU034F_A11_BG274853Tu01P019H01P019H071F1_095.ab1     9 
   71  C MoSU034R_A11_BG274853Tu01P019H01P019H071R1_095.ab1   501 
   83    MoSU034F_A11_BG274853Tu01P019H01P019H071F1_095.ab1    29 
   87  C MoSU034R_A11_BG274853Tu01P019H01P019H071R1_095.ab1   485 
  103    MoSU034F_A11_BG274853Tu01P019H01P019H071F1_095.ab1    49 
  131  C MoSU034R_A11_BG274853Tu01P019H01P019H071R1_095.ab1   441 
  143    MoSU034F_A11_BG274853Tu01P019H01P019H071F1_095.ab1    89 
  291  C MoSU034R_A11_BG274853Tu01P019H01P019H071R1_095.ab1   281 
  307    MoSU034F_A11_BG274853Tu01P019H01P019H071F1_095.ab1   253 
  399  C MoSU034R_A11_BG274853Tu01P019H01P019H071R1_095.ab1   173 
  529    MoSU034F_A11_BG274853Tu01P019H01P019H071F1_095.ab1   475 
  541  C MoSU034R_A11_BG274853Tu01P019H01P019H071R1_095.ab1    31 
  545    MoSU034F_A11_BG274853Tu01P019H01P019H071F1_095.ab1   491 
Contig length: old 626, new 626

Contig length: old 626, new 626
New start: 0