No. words: 1232; after pruning: 1206


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:482)  468  0.00 0.21 0.00  MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1        1   483 (138)  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   (127)   484     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   611 
  172    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1    44 
  188  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   424 
  196    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1    68 
  204  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   408 
  208    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1    80 
  220  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   392 
  232    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1   104 
  240  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   372 
  248    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1   120 
  252  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   360 
  260    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1   132 
  276  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   336 
  296    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1   168 
  300  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   312 
  304    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1   176 
  316  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   296 
  320    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1   192 
  328  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   284 
  332    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1   204 
  384  C MoSU004R_H01_BG604857Ld02P005B02B081R1_012.ab1   228 
  392    MoSU004F_H01_BG604857Ld02P005B02B081F1_012.ab1   264 
Contig length: old 749, new 749

Contig length: old 749, new 749
New start: 0