No. words: 1007; after pruning: 981


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:353)  349  0.00 0.00 0.00  MoSU004F_D02_BG604857Ld06P005B02B081F1_014.ab1        1   354 (154)  C MoSU004R_D02_BG604857Ld06P005B02B081R1_014.ab1   (145)   354     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1  C MoSU004R_D02_BG604857Ld06P005B02B081R1_014.ab1   499 
  195    MoSU004F_D02_BG604857Ld06P005B02B081F1_014.ab1    50 
  207  C MoSU004R_D02_BG604857Ld06P005B02B081R1_014.ab1   293 
  215    MoSU004F_D02_BG604857Ld06P005B02B081F1_014.ab1    70 
  223  C MoSU004R_D02_BG604857Ld06P005B02B081R1_014.ab1   277 
  227    MoSU004F_D02_BG604857Ld06P005B02B081F1_014.ab1    82 
  235  C MoSU004R_D02_BG604857Ld06P005B02B081R1_014.ab1   265 
  243    MoSU004F_D02_BG604857Ld06P005B02B081F1_014.ab1    98 
  427  C MoSU004R_D02_BG604857Ld06P005B02B081R1_014.ab1    73 
  431    MoSU004F_D02_BG604857Ld06P005B02B081F1_014.ab1   286 
Contig length: old 653, new 653

Contig length: old 653, new 653
New start: 0