No. words: 632; after pruning: 606


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    7   -0.5 -0.5 (1,1:269)  218  4.62 0.00 0.38  MoSU029F_G02_BM138650Sn25P005H01P023C011F1_004.ab1        8   267 (48)  C MoSU029R_G02_BM138650Sn25P005H01P023C011R1_004.ab1   (55)   262     4 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.5       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  110 nodes

 57 str. conn. components

Path
    1  C MoSU029R_G02_BM138650Sn25P005H01P023C011R1_004.ab1   317 
  157    MoSU029F_G02_BM138650Sn25P005H01P023C011F1_004.ab1   109 
  173  C MoSU029R_G02_BM138650Sn25P005H01P023C011R1_004.ab1   145 
  185    MoSU029F_G02_BM138650Sn25P005H01P023C011F1_004.ab1   137 
  205  C MoSU029R_G02_BM138650Sn25P005H01P023C011R1_004.ab1   113 
  209    MoSU029F_G02_BM138650Sn25P005H01P023C011F1_004.ab1   161 
Contig length: old 362, new 363

Contig length: old 363, new 363
New start: 0