No. words: 626; after pruning: 600


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 1.8 (1,1:263)  242  0.77 0.00 0.77  MoSU029F_E03_BM138650Sn31P005H01P023C011F1_023.ab1        7   265 (49)  C MoSU029R_E03_BM138650Sn31P005H01P023C011R1_023.ab1   (55)   257     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1  C MoSU029R_E03_BM138650Sn31P005H01P023C011R1_023.ab1   312 
  184    MoSU029F_E03_BM138650Sn31P005H01P023C011F1_023.ab1   135 
  280  C MoSU029R_E03_BM138650Sn31P005H01P023C011R1_023.ab1    33 
  284    MoSU029F_E03_BM138650Sn31P005H01P023C011F1_023.ab1   235 
Contig length: old 362, new 363

Contig length: old 363, new 363
New start: 0