No. words: 522; after pruning: 496


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 2.5 (1,1:217)  203  0.00 0.00 0.92  MoSU023F_C03_BQ160417As01P019B02P019B081F1_027.ab1        1   217 (41)  C MoSU023R_C03_BQ160417As01P019B02P019B081R1_027.ab1   (47)   217     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  104 nodes

 54 str. conn. components

Path
    1  C MoSU023R_C03_BQ160417As01P019B02P019B081R1_027.ab1   264 
   87    MoSU023F_C03_BQ160417As01P019B02P019B081F1_027.ab1    40 
  103  C MoSU023R_C03_BQ160417As01P019B02P019B081R1_027.ab1   162 
  111    MoSU023F_C03_BQ160417As01P019B02P019B081F1_027.ab1    64 
  123  C MoSU023R_C03_BQ160417As01P019B02P019B081R1_027.ab1   142 
  127    MoSU023F_C03_BQ160417As01P019B02P019B081F1_027.ab1    80 
  131  C MoSU023R_C03_BQ160417As01P019B02P019B081R1_027.ab1   134 
  143    MoSU023F_C03_BQ160417As01P019B02P019B081F1_027.ab1    96 
  207  C MoSU023R_C03_BQ160417As01P019B02P019B081R1_027.ab1    58 
  211    MoSU023F_C03_BQ160417As01P019B02P019B081F1_027.ab1   164 
  231  C MoSU023R_C03_BQ160417As01P019B02P019B081R1_027.ab1    34 
  235    MoSU023F_C03_BQ160417As01P019B02P019B081F1_027.ab1   188 
Contig length: old 304, new 305

Contig length: old 305, new 305
New start: 0