No. words: 757; after pruning: 731


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 4.3 (1,1:213)  204  0.00 0.00 0.47  MoSU023F_D04_BQ160417Ld06P019B02P019B081F1_026.ab1        1   213 (164)  C MoSU023R_D04_BQ160417Ld06P019B02P019B081R1_026.ab1   (167)   213     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  104 nodes

 54 str. conn. components

Path
    1  C MoSU023R_D04_BQ160417Ld06P019B02P019B081R1_026.ab1   380 
  215    MoSU023F_D04_BQ160417Ld06P019B02P019B081F1_026.ab1    48 
  219  C MoSU023R_D04_BQ160417Ld06P019B02P019B081R1_026.ab1   162 
  227    MoSU023F_D04_BQ160417Ld06P019B02P019B081F1_026.ab1    60 
  231  C MoSU023R_D04_BQ160417Ld06P019B02P019B081R1_026.ab1   150 
  243    MoSU023F_D04_BQ160417Ld06P019B02P019B081F1_026.ab1    76 
  255  C MoSU023R_D04_BQ160417Ld06P019B02P019B081R1_026.ab1   126 
  263    MoSU023F_D04_BQ160417Ld06P019B02P019B081F1_026.ab1    96 
  315  C MoSU023R_D04_BQ160417Ld06P019B02P019B081R1_026.ab1    66 
  319    MoSU023F_D04_BQ160417Ld06P019B02P019B081F1_026.ab1   152 
Contig length: old 543, new 544

Contig length: old 544, new 544
New start: 0