No. words: 509; after pruning: 483


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.0 (1,1:206)  194  0.97 0.00 0.48  MoSU023F_A03_BQ160417Tu01P019B02P019B081F1_031.ab1        1   207 (42)  C MoSU023R_A03_BQ160417Tu01P019B02P019B081R1_031.ab1   (54)   206     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  90 nodes

 47 str. conn. components

Path
    1  C MoSU023R_A03_BQ160417Tu01P019B02P019B081R1_031.ab1   260 
   62    MoSU023F_A03_BQ160417Tu01P019B02P019B081F1_031.ab1     8 
   97  C MoSU023R_A03_BQ160417Tu01P019B02P019B081R1_031.ab1   164 
  109    MoSU023F_A03_BQ160417Tu01P019B02P019B081F1_031.ab1    55 
  117  C MoSU023R_A03_BQ160417Tu01P019B02P019B081R1_031.ab1   144 
  121    MoSU023F_A03_BQ160417Tu01P019B02P019B081F1_031.ab1    67 
  125  C MoSU023R_A03_BQ160417Tu01P019B02P019B081R1_031.ab1   136 
  173    MoSU023F_A03_BQ160417Tu01P019B02P019B081F1_031.ab1   119 
  221  C MoSU023R_A03_BQ160417Tu01P019B02P019B081R1_031.ab1    40 
  233    MoSU023F_A03_BQ160417Tu01P019B02P019B081F1_031.ab1   179 
Contig length: old 302, new 303

Contig length: old 303, new 303
New start: 0