No. words: 1641; after pruning: 1601


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.4 (1,1:1330)  304  0.00 0.00 0.32  MoSU010F_C01_BQ170165As01P005F06P005F121F1_011.ab1      508   818 (0)  C MoSU010R_C01_BQ170165As01P005F06P005F121R1_011.ab1   (0)   823   514 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1    MoSU010F_C01_BQ170165As01P005F06P005F121F1_011.ab1     1 
  641  C MoSU010R_C01_BQ170165As01P005F06P005F121R1_011.ab1   691 
  649    MoSU010F_C01_BQ170165As01P005F06P005F121F1_011.ab1   649 
  657  C MoSU010R_C01_BQ170165As01P005F06P005F121R1_011.ab1   675 
  661    MoSU010F_C01_BQ170165As01P005F06P005F121F1_011.ab1   661 
  665  C MoSU010R_C01_BQ170165As01P005F06P005F121R1_011.ab1   667 
  669    MoSU010F_C01_BQ170165As01P005F06P005F121F1_011.ab1   669 
  681  C MoSU010R_C01_BQ170165As01P005F06P005F121R1_011.ab1   651 
  693    MoSU010F_C01_BQ170165As01P005F06P005F121F1_011.ab1   693 
  701  C MoSU010R_C01_BQ170165As01P005F06P005F121R1_011.ab1   631 
  745    MoSU010F_C01_BQ170165As01P005F06P005F121F1_011.ab1   745 
  749  C MoSU010R_C01_BQ170165As01P005F06P005F121R1_011.ab1   583 
Contig length: old 1331, new 1331

Contig length: old 1331, new 1331
New start: 0 
S Change at: 913; seg lengths: entry 1, contig 1