No. words: 1568; after pruning: 1542


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:1295)  263  0.74 0.00 0.00  MoSU010F_D02_BQ170165Ld06P005F06P005F121F1_010.ab1      545   816 (0)  C MoSU010R_D02_BQ170165Ld06P005F06P005F121R1_010.ab1   (0)   752   481 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1    MoSU010F_D02_BQ170165Ld06P005F06P005F121F1_010.ab1     1 
  636  C MoSU010R_D02_BQ170165Ld06P005F06P005F121R1_010.ab1   661 
  640    MoSU010F_D02_BQ170165Ld06P005F06P005F121F1_010.ab1   640 
  644  C MoSU010R_D02_BQ170165Ld06P005F06P005F121R1_010.ab1   653 
  648    MoSU010F_D02_BQ170165Ld06P005F06P005F121F1_010.ab1   648 
  660  C MoSU010R_D02_BQ170165Ld06P005F06P005F121R1_010.ab1   637 
  668    MoSU010F_D02_BQ170165Ld06P005F06P005F121F1_010.ab1   668 
  676  C MoSU010R_D02_BQ170165Ld06P005F06P005F121R1_010.ab1   621 
  680    MoSU010F_D02_BQ170165Ld06P005F06P005F121F1_010.ab1   680 
  684  C MoSU010R_D02_BQ170165Ld06P005F06P005F121R1_010.ab1   613 
Contig length: old 1296, new 1296

Contig length: old 1296, new 1296
New start: 0