No. words: 1370; after pruning: 1344


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.3 (1,1:1309)   59  0.00 0.00 0.00  MoSU010F_G02_BQ170165Ld09P005F06P005F121F1_004.ab1      689   748 (0)  C MoSU010R_G02_BQ170165Ld09P005F06P005F121R1_004.ab1   (0)   622   563 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  32 nodes

 18 str. conn. components

Path
    1    MoSU010F_G02_BQ170165Ld09P005F06P005F121F1_004.ab1     1 
  692  C MoSU010R_G02_BQ170165Ld09P005F06P005F121R1_004.ab1   619 
Contig length: old 1310, new 1310

Contig length: old 1310, new 1310
New start: 0