No. words: 1391; after pruning: 1365


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.6 (1,1:655)  622  0.00 0.15 0.15  MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1        1   653 (41)  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   (41)   656     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   697 
   52    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1    10 
   56  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   642 
   60    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1    18 
   64  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   634 
   68    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1    26 
   76  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   622 
   88    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1    46 
  100  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   598 
  124    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1    82 
  128  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   570 
  148    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   106 
  152  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   546 
  168    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   126 
  184  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   514 
  220    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   178 
  232  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   466 
  268    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   226 
  276  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   422 
  360    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   318 
  368  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   330 
  396    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   354 
  416  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1   282 
  608    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   566 
  612  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1    86 
  632    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   590 
  648  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1    50 
  656    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   614 
  668  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1    30 
  676    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   634 
  680  C MoSU027R_F11_BQ170165Sn24P005F06P030H091R1_085.ab1    18 
  684    MoSU027F_F11_BQ170165Sn24P005F06P030H091F1_085.ab1   642 
Contig length: old 735, new 736

Contig length: old 736, new 736
New start: 0