No. words: 1849; after pruning: 1795


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.7 (1,1:1003)  830  0.24 0.00 0.00  MoSU027F_H03_BQ170165Sn24P030G08P005F121F1_017.ab1      126   970 (0)  C MoSU027R_H03_BQ170165Sn24P030G08P005F121R1_017.ab1   (0)   879    35 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  418 nodes

 211 str. conn. components

Path
    1    MoSU027F_H03_BQ170165Sn24P030G08P005F121F1_017.ab1     1 
  449  C MoSU027R_H03_BQ170165Sn24P030G08P005F121R1_017.ab1   556 
  481    MoSU027F_H03_BQ170165Sn24P030G08P005F121F1_017.ab1   481 
  565  C MoSU027R_H03_BQ170165Sn24P030G08P005F121R1_017.ab1   440 
  585    MoSU027F_H03_BQ170165Sn24P030G08P005F121F1_017.ab1   585 
  669  C MoSU027R_H03_BQ170165Sn24P030G08P005F121R1_017.ab1   336 
Contig length: old 1004, new 1004

Contig length: old 1004, new 1004
New start: 0