No. words: 1073; after pruning: 1047


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:492)  462  0.41 0.20 0.20  MoSU027F_A12_BQ170165Sn26P005F06P030H091F1_096.ab1        1   493 (45)  C MoSU027R_A12_BQ170165Sn26P005F06P030H091R1_096.ab1   (42)   493     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C MoSU027R_A12_BQ170165Sn26P005F06P030H091R1_096.ab1   535 
   73    MoSU027F_A12_BQ170165Sn26P005F06P030H091F1_096.ab1    30 
   77  C MoSU027R_A12_BQ170165Sn26P005F06P030H091R1_096.ab1   459 
   93    MoSU027F_A12_BQ170165Sn26P005F06P030H091F1_096.ab1    50 
   97  C MoSU027R_A12_BQ170165Sn26P005F06P030H091R1_096.ab1   439 
  109    MoSU027F_A12_BQ170165Sn26P005F06P030H091F1_096.ab1    66 
  113  C MoSU027R_A12_BQ170165Sn26P005F06P030H091R1_096.ab1   423 
  137    MoSU027F_A12_BQ170165Sn26P005F06P030H091F1_096.ab1    94 
  141  C MoSU027R_A12_BQ170165Sn26P005F06P030H091R1_096.ab1   395 
  441    MoSU027F_A12_BQ170165Sn26P005F06P030H091F1_096.ab1   398 
  453  C MoSU027R_A12_BQ170165Sn26P005F06P030H091R1_096.ab1    83 
  473    MoSU027F_A12_BQ170165Sn26P005F06P030H091F1_096.ab1   430 
Contig length: old 580, new 581

Contig length: old 581, new 581
New start: 0