No. words: 1383; after pruning: 1343


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 13.7 (1,1:649)  616  0.15 0.15 0.15  MoSU027F_B12_BQ170165Sn27P005F06P030H091F1_094.ab1        1   647 (46)  C MoSU027R_B12_BQ170165Sn27P005F06P030H091R1_094.ab1   (40)   650     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU027R_B12_BQ170165Sn27P005F06P030H091R1_094.ab1   690 
   50    MoSU027F_B12_BQ170165Sn27P005F06P030H091F1_094.ab1     9 
  141  C MoSU027R_B12_BQ170165Sn27P005F06P030H091R1_094.ab1   550 
  145    MoSU027F_B12_BQ170165Sn27P005F06P030H091F1_094.ab1   104 
  433  C MoSU027R_B12_BQ170165Sn27P005F06P030H091R1_094.ab1   258 
  605    MoSU027F_B12_BQ170165Sn27P005F06P030H091F1_094.ab1   564 
  613  C MoSU027R_B12_BQ170165Sn27P005F06P030H091R1_094.ab1    78 
  653    MoSU027F_B12_BQ170165Sn27P005F06P030H091F1_094.ab1   612 
  668  C MoSU027R_B12_BQ170165Sn27P005F06P030H091R1_094.ab1    24 
  676    MoSU027F_B12_BQ170165Sn27P005F06P030H091F1_094.ab1   635 
  680  C MoSU027R_B12_BQ170165Sn27P005F06P030H091R1_094.ab1    12 
  684    MoSU027F_B12_BQ170165Sn27P005F06P030H091F1_094.ab1   643 
Contig length: old 733, new 734

Contig length: old 734, new 734
New start: 0