No. words: 1379; after pruning: 1353


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.8 (1,1:643)  616  0.16 0.00 0.00  MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1        5   644 (48)  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   (47)   640     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   687 
   55    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1    12 
   79  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   609 
   87    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1    44 
   95  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   593 
  107    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1    64 
  111  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   577 
  123    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1    80 
  127  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   561 
  171    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   128 
  179  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   509 
  219    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   176 
  223  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   465 
  267    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   224 
  275  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   413 
  387    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   344 
  391  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   297 
  395    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   352 
  415  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1   273 
  595    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   552 
  603  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1    85 
  607    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   564 
  615  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1    73 
  627    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   584 
  671  C MoSU027R_C12_BQ170165Sn28P005F06P030H091R1_092.ab1    17 
  675    MoSU027F_C12_BQ170165Sn28P005F06P030H091F1_092.ab1   632 
Contig length: old 735, new 735

Contig length: old 735, new 735
New start: 0