No. words: 1388; after pruning: 1362


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 12.3 (1,1:653)  623  0.00 0.00 0.15  MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1        5   654 (38)  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   (47)   649     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   696 
   55    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1    12 
   63  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   634 
   67    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1    24 
   83  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   614 
   87    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1    44 
   95  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   602 
  119    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1    76 
  127  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   570 
  163    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   120 
  175  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   522 
  215    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   172 
  227  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   470 
  271    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   228 
  275  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   422 
  303    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   260 
  311  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   386 
  347    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   304 
  355  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   342 
  359    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   316 
  379  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   318 
  387    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   344 
  391  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   306 
  395    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   352 
  435  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   262 
  555    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   512 
  563  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1   134 
  595    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   552 
  615  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1    82 
  627    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   584 
  671  C MoSU027R_D12_BQ170165Sn29P005F06P030H091R1_090.ab1    26 
  675    MoSU027F_D12_BQ170165Sn29P005F06P030H091F1_090.ab1   632 
Contig length: old 734, new 735

Contig length: old 735, new 735
New start: 0