No. words: 1385; after pruning: 1359


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.0 (1,1:647)  613  0.16 0.00 0.16  MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1        4   645 (48)  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1   (48)   644     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1   692 
   60    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1    15 
   64  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1   629 
   68    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1    23 
   76  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1   617 
  265    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1   220 
  273  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1   420 
  545    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1   500 
  549  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1   144 
  597    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1   552 
  605  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1    88 
  637    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1   592 
  641  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1    52 
  645    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1   600 
  670  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1    24 
  678    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1   633 
  682  C MoSU027R_E12_BQ170165Sn30P005F06P030H091R1_088.ab1    12 
  686    MoSU027F_E12_BQ170165Sn30P005F06P030H091F1_088.ab1   641 
Contig length: old 737, new 738

Contig length: old 738, new 738
New start: 0