No. words: 1649; after pruning: 1623


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:1000)  634  0.15 0.00 0.00  MoSU028F_B10_BQ170165Sn30P030G08P005F121F1_078.ab1      222   869 (0)  C MoSU028R_B10_BQ170165Sn30P030G08P005F121R1_078.ab1   (0)   780   133 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1    MoSU028F_B10_BQ170165Sn30P030G08P005F121F1_078.ab1     1 
  426  C MoSU028R_B10_BQ170165Sn30P030G08P005F121R1_078.ab1   576 
  430    MoSU028F_B10_BQ170165Sn30P030G08P005F121F1_078.ab1   430 
  446  C MoSU028R_B10_BQ170165Sn30P030G08P005F121R1_078.ab1   556 
  450    MoSU028F_B10_BQ170165Sn30P030G08P005F121F1_078.ab1   450 
  486  C MoSU028R_B10_BQ170165Sn30P030G08P005F121R1_078.ab1   516 
  502    MoSU028F_B10_BQ170165Sn30P030G08P005F121F1_078.ab1   502 
  522  C MoSU028R_B10_BQ170165Sn30P030G08P005F121R1_078.ab1   480 
  542    MoSU028F_B10_BQ170165Sn30P030G08P005F121F1_078.ab1   542 
  554  C MoSU028R_B10_BQ170165Sn30P030G08P005F121R1_078.ab1   448 
Contig length: old 1001, new 1001

Contig length: old 1001, new 1001
New start: 0