No. words: 1676; after pruning: 1650


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:1022)  637  0.31 0.00 0.00  MoSU028F_C10_BQ170165Sn31P030G08P005F121F1_076.ab1      151   803 (0)  C MoSU028R_C10_BQ170165Sn31P030G08P005F121R1_076.ab1   (0)   873   221 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1    MoSU028F_C10_BQ170165Sn31P030G08P005F121F1_076.ab1     1 
  420  C MoSU028R_C10_BQ170165Sn31P030G08P005F121R1_076.ab1   604 
  424    MoSU028F_C10_BQ170165Sn31P030G08P005F121F1_076.ab1   424 
  584  C MoSU028R_C10_BQ170165Sn31P030G08P005F121R1_076.ab1   440 
  612    MoSU028F_C10_BQ170165Sn31P030G08P005F121F1_076.ab1   612 
  664  C MoSU028R_C10_BQ170165Sn31P030G08P005F121R1_076.ab1   360 
Contig length: old 1023, new 1023

Contig length: old 1023, new 1023
New start: 0