No. words: 1068; after pruning: 1042


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 10.4 (1,1:489)  468  0.00 0.21 0.00  MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1        1   487 (48)  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1   (42)   491     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1   533 
   76    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1    33 
   80  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1   454 
  204    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   161 
  208  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1   326 
  396    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   353 
  400  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1   134 
  420    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   377 
  424  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1   110 
  440    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   397 
  444  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1    90 
  448    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   405 
  452  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1    82 
  472    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   429 
  480  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1    54 
  484    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   441 
  496  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1    38 
  500    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   457 
  512  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1    22 
  516    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   473 
  520  C MoSU027R_G12_BQ170165Sn32P005F06P030H091R1_084.ab1    14 
  524    MoSU027F_G12_BQ170165Sn32P005F06P030H091F1_084.ab1   481 
Contig length: old 578, new 578

Contig length: old 578, new 578
New start: 0