No. words: 1756; after pruning: 1716


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.3 (1,1:970)  769  0.25 0.00 0.00  MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1      106   890 (0)  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   (0)   866    82 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1     1 
  353  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   619 
  357    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   357 
  361  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   611 
  365    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   365 
  428  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   544 
  436    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   436 
  448  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   524 
  456    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   456 
  460  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   512 
  472    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   472 
  492  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   480 
  520    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   520 
  528  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   444 
  536    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   536 
  552  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   420 
  596    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   596 
  600  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   372 
  640    MoSU028F_H09_BQ170165Sn32P030F08P005F121F1_065.ab1   640 
  644  C MoSU028R_H09_BQ170165Sn32P030F08P005F121R1_065.ab1   328 
Contig length: old 971, new 971

Contig length: old 971, new 971
New start: 0