No. words: 1649; after pruning: 1609


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:1014)  616  0.32 0.16 0.00  MoSU028F_D10_BQ170165Sn32P030G08P005F121F1_074.ab1      253   885 (0)  C MoSU028R_D10_BQ170165Sn32P030G08P005F121R1_074.ab1   (0)   764   131 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1    MoSU028F_D10_BQ170165Sn32P030G08P005F121F1_074.ab1     1 
  492  C MoSU028R_D10_BQ170165Sn32P030G08P005F121R1_074.ab1   525 
  544    MoSU028F_D10_BQ170165Sn32P030G08P005F121F1_074.ab1   544 
  568  C MoSU028R_D10_BQ170165Sn32P030G08P005F121R1_074.ab1   449 
  604    MoSU028F_D10_BQ170165Sn32P030G08P005F121F1_074.ab1   604 
  608  C MoSU028R_D10_BQ170165Sn32P030G08P005F121R1_074.ab1   409 
Contig length: old 1015, new 1016

Contig length: old 1016, new 1016
New start: 0