No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 13.9 (1,1:650)  618  0.00 0.15 0.15  MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1        1   648 (48)  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   (39)   651     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   690 
   54    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1    14 
   62  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   629 
   66    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1    26 
   74  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   617 
   90    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1    50 
  102  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   589 
  166    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   126 
  174  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   517 
  302    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   262 
  306  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   385 
  358    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   318 
  366  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   325 
  410    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   370 
  414  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   277 
  546    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   506 
  550  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1   141 
  598    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   558 
  602  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1    89 
  606    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   566 
  614  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1    77 
  630    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   590 
  646  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1    45 
  654    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   614 
  669  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1    23 
  677    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   637 
  681  C MoSU027R_A10_BQ170165Ta11P005F06P030H091R1_080.ab1    11 
  685    MoSU027F_A10_BQ170165Ta11P005F06P030H091F1_080.ab1   645 
Contig length: old 735, new 736

Contig length: old 736, new 736
New start: 0