No. words: 1738; after pruning: 1712


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.8 (1,1:980)  747  0.00 0.00 0.00  MoSU026F_C08_BQ170165Ta11P030F08P005F121F1_060.ab1      150   906 (0)  C MoSU026R_C08_BQ170165Ta11P030F08P005F121R1_060.ab1   (0)   832    76 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1    MoSU026F_C08_BQ170165Ta11P030F08P005F121F1_060.ab1     1 
  313  C MoSU026R_C08_BQ170165Ta11P030F08P005F121R1_060.ab1   669 
  317    MoSU026F_C08_BQ170165Ta11P030F08P005F121F1_060.ab1   317 
  349  C MoSU026R_C08_BQ170165Ta11P030F08P005F121R1_060.ab1   633 
  389    MoSU026F_C08_BQ170165Ta11P030F08P005F121F1_060.ab1   389 
  401  C MoSU026R_C08_BQ170165Ta11P030F08P005F121R1_060.ab1   581 
  409    MoSU026F_C08_BQ170165Ta11P030F08P005F121F1_060.ab1   409 
  413  C MoSU026R_C08_BQ170165Ta11P030F08P005F121R1_060.ab1   569 
  433    MoSU026F_C08_BQ170165Ta11P030F08P005F121F1_060.ab1   433 
  441  C MoSU026R_C08_BQ170165Ta11P030F08P005F121R1_060.ab1   541 
  449    MoSU026F_C08_BQ170165Ta11P030F08P005F121F1_060.ab1   449 
  457  C MoSU026R_C08_BQ170165Ta11P030F08P005F121R1_060.ab1   525 
Contig length: old 981, new 981

Contig length: old 981, new 981
New start: 0