No. words: 1710; after pruning: 1684


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:990)  710  0.00 0.00 0.00  MoSU026F_E08_BQ170165Ta13P030F08P005F121F1_056.ab1      150   868 (0)  C MoSU026R_E08_BQ170165Ta13P030F08P005F121R1_056.ab1   (0)   842   124 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1    MoSU026F_E08_BQ170165Ta13P030F08P005F121F1_056.ab1     1 
  393  C MoSU026R_E08_BQ170165Ta13P030F08P005F121R1_056.ab1   599 
  397    MoSU026F_E08_BQ170165Ta13P030F08P005F121F1_056.ab1   397 
  405  C MoSU026R_E08_BQ170165Ta13P030F08P005F121R1_056.ab1   587 
  409    MoSU026F_E08_BQ170165Ta13P030F08P005F121F1_056.ab1   409 
  417  C MoSU026R_E08_BQ170165Ta13P030F08P005F121R1_056.ab1   575 
  433    MoSU026F_E08_BQ170165Ta13P030F08P005F121F1_056.ab1   433 
  449  C MoSU026R_E08_BQ170165Ta13P030F08P005F121R1_056.ab1   543 
  457    MoSU026F_E08_BQ170165Ta13P030F08P005F121F1_056.ab1   457 
  461  C MoSU026R_E08_BQ170165Ta13P030F08P005F121R1_056.ab1   531 
  501    MoSU026F_E08_BQ170165Ta13P030F08P005F121F1_056.ab1   501 
  509  C MoSU026R_E08_BQ170165Ta13P030F08P005F121R1_056.ab1   483 
  561    MoSU026F_E08_BQ170165Ta13P030F08P005F121F1_056.ab1   561 
  565  C MoSU026R_E08_BQ170165Ta13P030F08P005F121R1_056.ab1   427 
Contig length: old 991, new 991

Contig length: old 991, new 991
New start: 0