No. words: 1774; after pruning: 1734


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.9 (1,1:1010)  751  0.13 0.00 0.00  MoSU027F_E02_BQ170165Ta13P030G08P005F121F1_008.ab1      147   909 (0)  C MoSU027R_E02_BQ170165Ta13P030G08P005F121R1_008.ab1   (0)   865   103 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  382 nodes

 193 str. conn. components

Path
    1    MoSU027F_E02_BQ170165Ta13P030G08P005F121F1_008.ab1     1 
  466  C MoSU027R_E02_BQ170165Ta13P030G08P005F121R1_008.ab1   546 
  558    MoSU027F_E02_BQ170165Ta13P030G08P005F121F1_008.ab1   558 
  574  C MoSU027R_E02_BQ170165Ta13P030G08P005F121R1_008.ab1   438 
  614    MoSU027F_E02_BQ170165Ta13P030G08P005F121F1_008.ab1   614 
  642  C MoSU027R_E02_BQ170165Ta13P030G08P005F121R1_008.ab1   370 
Contig length: old 1011, new 1011

Contig length: old 1011, new 1011
New start: 0