No. words: 1629; after pruning: 1603


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.7 (1,1:967)  651  0.00 0.00 0.00  MoSU026F_F08_BQ170165Ta14P030F08P005F121F1_054.ab1      102   762 (0)  C MoSU026R_F08_BQ170165Ta14P030F08P005F121R1_054.ab1   (0)   867   207 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1    MoSU026F_F08_BQ170165Ta14P030F08P005F121F1_054.ab1     1 
  313  C MoSU026R_F08_BQ170165Ta14P030F08P005F121R1_054.ab1   656 
  317    MoSU026F_F08_BQ170165Ta14P030F08P005F121F1_054.ab1   317 
  357  C MoSU026R_F08_BQ170165Ta14P030F08P005F121R1_054.ab1   612 
  361    MoSU026F_F08_BQ170165Ta14P030F08P005F121F1_054.ab1   361 
  377  C MoSU026R_F08_BQ170165Ta14P030F08P005F121R1_054.ab1   592 
  409    MoSU026F_F08_BQ170165Ta14P030F08P005F121F1_054.ab1   409 
  417  C MoSU026R_F08_BQ170165Ta14P030F08P005F121R1_054.ab1   552 
  429    MoSU026F_F08_BQ170165Ta14P030F08P005F121F1_054.ab1   429 
  437  C MoSU026R_F08_BQ170165Ta14P030F08P005F121R1_054.ab1   532 
Contig length: old 968, new 968

Contig length: old 968, new 968
New start: 0