No. words: 1648; after pruning: 1608


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:1003)  633  0.16 0.00 0.00  MoSU027F_F02_BQ170165Ta14P030G08P005F121F1_006.ab1      134   777 (0)  C MoSU027R_F02_BQ170165Ta14P030G08P005F121R1_006.ab1   (0)   871   228 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1    MoSU027F_F02_BQ170165Ta14P030G08P005F121F1_006.ab1     1 
  582  C MoSU027R_F02_BQ170165Ta14P030G08P005F121R1_006.ab1   423 
  606    MoSU027F_F02_BQ170165Ta14P030G08P005F121F1_006.ab1   606 
  638  C MoSU027R_F02_BQ170165Ta14P030G08P005F121R1_006.ab1   367 
Contig length: old 1004, new 1004

Contig length: old 1004, new 1004
New start: 0