No. words: 1380; after pruning: 1354


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:645)  610  0.62 0.15 0.00  MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1        1   646 (49)  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1   (38)   647     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1   685 
   56    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1    17 
   60  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1   626 
   68    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1    29 
   72  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1   614 
  167    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   128 
  175  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1   511 
  263    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   224 
  271  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1   415 
  299    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   260 
  303  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1   383 
  355    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   316 
  367  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1   319 
  595    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   556 
  599  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1    87 
  631    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   592 
  643  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1    43 
  655    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   616 
  663  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1    23 
  671    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   632 
  675  C MoSU027R_E10_BQ170165Ta15P005F06P030H091R1_072.ab1    11 
  679    MoSU027F_E10_BQ170165Ta15P005F06P030H091F1_072.ab1   640 
Contig length: old 734, new 734

Contig length: old 734, new 734
New start: 0