No. words: 1714; after pruning: 1688


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:985)  712  0.00 0.00 0.14  MoSU026F_G08_BQ170165Ta15P030F08P005F121F1_052.ab1      101   829 (0)  C MoSU026R_G08_BQ170165Ta15P030F08P005F121R1_052.ab1   (0)   885   158 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1    MoSU026F_G08_BQ170165Ta15P030F08P005F121F1_052.ab1     1 
  331  C MoSU026R_G08_BQ170165Ta15P030F08P005F121R1_052.ab1   656 
  335    MoSU026F_G08_BQ170165Ta15P030F08P005F121F1_052.ab1   335 
  387  C MoSU026R_G08_BQ170165Ta15P030F08P005F121R1_052.ab1   600 
  391    MoSU026F_G08_BQ170165Ta15P030F08P005F121F1_052.ab1   391 
  395  C MoSU026R_G08_BQ170165Ta15P030F08P005F121R1_052.ab1   592 
  423    MoSU026F_G08_BQ170165Ta15P030F08P005F121F1_052.ab1   423 
  435  C MoSU026R_G08_BQ170165Ta15P030F08P005F121R1_052.ab1   552 
  447    MoSU026F_G08_BQ170165Ta15P030F08P005F121F1_052.ab1   447 
  455  C MoSU026R_G08_BQ170165Ta15P030F08P005F121R1_052.ab1   532 
  483    MoSU026F_G08_BQ170165Ta15P030F08P005F121F1_052.ab1   483 
  487  C MoSU026R_G08_BQ170165Ta15P030F08P005F121R1_052.ab1   500 
Contig length: old 986, new 986

Contig length: old 986, new 986
New start: 0