No. words: 1645; after pruning: 1619


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:1000)  634  0.00 0.00 0.00  MoSU027F_G02_BQ170165Ta15P030G08P005F121F1_004.ab1      131   774 (0)  C MoSU027R_G02_BQ170165Ta15P030G08P005F121R1_004.ab1   (0)   871   228 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1    MoSU027F_G02_BQ170165Ta15P030G08P005F121F1_004.ab1     1 
  578  C MoSU027R_G02_BQ170165Ta15P030G08P005F121R1_004.ab1   424 
  582    MoSU027F_G02_BQ170165Ta15P030G08P005F121F1_004.ab1   582 
  638  C MoSU027R_G02_BQ170165Ta15P030G08P005F121R1_004.ab1   364 
Contig length: old 1001, new 1001

Contig length: old 1001, new 1001
New start: 0