No. words: 1417; after pruning: 1391


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.0 (1,1:982)  419  0.69 0.00 0.00  MoSU026F_H08_BQ170165Ta16P030F08P005F121F1_050.ab1      385   818 (0)  C MoSU026R_H08_BQ170165Ta16P030F08P005F121R1_050.ab1   (0)   599   166 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1    MoSU026F_H08_BQ170165Ta16P030F08P005F121F1_050.ab1     1 
  569  C MoSU026R_H08_BQ170165Ta16P030F08P005F121R1_050.ab1   415 
  581    MoSU026F_H08_BQ170165Ta16P030F08P005F121F1_050.ab1   581 
  601  C MoSU026R_H08_BQ170165Ta16P030F08P005F121R1_050.ab1   383 
  605    MoSU026F_H08_BQ170165Ta16P030F08P005F121F1_050.ab1   605 
  613  C MoSU026R_H08_BQ170165Ta16P030F08P005F121R1_050.ab1   371 
  621    MoSU026F_H08_BQ170165Ta16P030F08P005F121F1_050.ab1   621 
  649  C MoSU026R_H08_BQ170165Ta16P030F08P005F121R1_050.ab1   335 
  653    MoSU026F_H08_BQ170165Ta16P030F08P005F121F1_050.ab1   653 
  657  C MoSU026R_H08_BQ170165Ta16P030F08P005F121R1_050.ab1   327 
  705    MoSU026F_H08_BQ170165Ta16P030F08P005F121F1_050.ab1   705 
  709  C MoSU026R_H08_BQ170165Ta16P030F08P005F121R1_050.ab1   275 
Contig length: old 983, new 983

Contig length: old 983, new 983
New start: 0