No. words: 1382; after pruning: 1356


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:645)  621  0.00 0.15 0.00  MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1        1   646 (47)  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   (42)   647     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   689 
   56    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1    13 
   64  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   626 
   68    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1    25 
   88  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   602 
   92    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1    49 
   96  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   594 
  124    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1    81 
  128  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   562 
  168    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   125 
  180  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   510 
  292    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   249 
  316  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   374 
  348    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   305 
  392  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   298 
  396    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   353 
  408  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   282 
  416    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   373 
  444  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   246 
  456    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   413 
  460  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   230 
  548    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   505 
  552  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   138 
  556    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   513 
  560  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1   130 
  632    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   589 
  644  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1    46 
  660    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   617 
  668  C MoSU027R_G10_BQ170165Ta17P005F06P030H091R1_068.ab1    22 
  680    MoSU027F_G10_BQ170165Ta17P005F06P030H091F1_068.ab1   637 
Contig length: old 736, new 736

Contig length: old 736, new 736
New start: 0