No. words: 1704; after pruning: 1664


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:983)  710  0.14 0.00 0.00  MoSU026F_A09_BQ170165Ta17P030F08P005F121F1_079.ab1      154   873 (0)  C MoSU026R_A09_BQ170165Ta17P030F08P005F121R1_079.ab1   (0)   831   112 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  360 nodes

 182 str. conn. components

Path
    1    MoSU026F_A09_BQ170165Ta17P030F08P005F121F1_079.ab1     1 
  317  C MoSU026R_A09_BQ170165Ta17P030F08P005F121R1_079.ab1   668 
  321    MoSU026F_A09_BQ170165Ta17P030F08P005F121F1_079.ab1   321 
  333  C MoSU026R_A09_BQ170165Ta17P030F08P005F121R1_079.ab1   652 
  337    MoSU026F_A09_BQ170165Ta17P030F08P005F121F1_079.ab1   337 
  377  C MoSU026R_A09_BQ170165Ta17P030F08P005F121R1_079.ab1   608 
  381    MoSU026F_A09_BQ170165Ta17P030F08P005F121F1_079.ab1   381 
  389  C MoSU026R_A09_BQ170165Ta17P030F08P005F121R1_079.ab1   596 
  429    MoSU026F_A09_BQ170165Ta17P030F08P005F121F1_079.ab1   429 
  433  C MoSU026R_A09_BQ170165Ta17P030F08P005F121R1_079.ab1   552 
Contig length: old 984, new 984

Contig length: old 984, new 984
New start: 0