No. words: 1385; after pruning: 1359


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:660)  600  1.51 0.15 0.15  MoSU027F_H10_BQ170165Ta18P005F06P030H091F1_066.ab1        1   661 (27)  C MoSU027R_H10_BQ170165Ta18P005F06P030H091R1_066.ab1   (36)   661     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C MoSU027R_H10_BQ170165Ta18P005F06P030H091R1_066.ab1   697 
   55    MoSU027F_H10_BQ170165Ta18P005F06P030H091F1_066.ab1    18 
   75  C MoSU027R_H10_BQ170165Ta18P005F06P030H091R1_066.ab1   623 
  163    MoSU027F_H10_BQ170165Ta18P005F06P030H091F1_066.ab1   126 
  179  C MoSU027R_H10_BQ170165Ta18P005F06P030H091R1_066.ab1   519 
  195    MoSU027F_H10_BQ170165Ta18P005F06P030H091F1_066.ab1   158 
  259  C MoSU027R_H10_BQ170165Ta18P005F06P030H091R1_066.ab1   439 
  267    MoSU027F_H10_BQ170165Ta18P005F06P030H091F1_066.ab1   230 
  275  C MoSU027R_H10_BQ170165Ta18P005F06P030H091R1_066.ab1   423 
  291    MoSU027F_H10_BQ170165Ta18P005F06P030H091F1_066.ab1   254 
  299  C MoSU027R_H10_BQ170165Ta18P005F06P030H091R1_066.ab1   399 
  359    MoSU027F_H10_BQ170165Ta18P005F06P030H091F1_066.ab1   322 
  371  C MoSU027R_H10_BQ170165Ta18P005F06P030H091R1_066.ab1   327 
  693    MoSU027F_H10_BQ170165Ta18P005F06P030H091F1_066.ab1   657 
Contig length: old 724, new 724

Contig length: old 724, new 724
New start: 0