No. words: 1789; after pruning: 1749


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.9 (1,1:982)  792  0.12 0.00 0.00  MoSU026F_B09_BQ170165Ta18P030F08P005F121F1_077.ab1      101   906 (0)  C MoSU026R_B09_BQ170165Ta18P030F08P005F121R1_077.ab1   (0)   883    78 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1    MoSU026F_B09_BQ170165Ta18P030F08P005F121F1_077.ab1     1 
  290  C MoSU026R_B09_BQ170165Ta18P030F08P005F121R1_077.ab1   694 
  294    MoSU026F_B09_BQ170165Ta18P030F08P005F121F1_077.ab1   294 
  314  C MoSU026R_B09_BQ170165Ta18P030F08P005F121R1_077.ab1   670 
  318    MoSU026F_B09_BQ170165Ta18P030F08P005F121F1_077.ab1   318 
  390  C MoSU026R_B09_BQ170165Ta18P030F08P005F121R1_077.ab1   594 
  394    MoSU026F_B09_BQ170165Ta18P030F08P005F121F1_077.ab1   394 
  402  C MoSU026R_B09_BQ170165Ta18P030F08P005F121R1_077.ab1   582 
  430    MoSU026F_B09_BQ170165Ta18P030F08P005F121F1_077.ab1   430 
  438  C MoSU026R_B09_BQ170165Ta18P030F08P005F121R1_077.ab1   546 
  454    MoSU026F_B09_BQ170165Ta18P030F08P005F121F1_077.ab1   454 
  458  C MoSU026R_B09_BQ170165Ta18P030F08P005F121R1_077.ab1   526 
Contig length: old 983, new 983

Contig length: old 983, new 983
New start: 0