No. words: 1738; after pruning: 1698


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:1015)  701  0.55 0.00 0.00  MoSU027F_B03_BQ170165Ta18P030G08P005F121F1_029.ab1      145   866 (0)  C MoSU027R_B03_BQ170165Ta18P030G08P005F121R1_029.ab1   (0)   872   151 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1    MoSU027F_B03_BQ170165Ta18P030G08P005F121F1_029.ab1     1 
  412  C MoSU027R_B03_BQ170165Ta18P030G08P005F121R1_029.ab1   605 
  424    MoSU027F_B03_BQ170165Ta18P030G08P005F121F1_029.ab1   424 
  448  C MoSU027R_B03_BQ170165Ta18P030G08P005F121R1_029.ab1   569 
  544    MoSU027F_B03_BQ170165Ta18P030G08P005F121F1_029.ab1   544 
  564  C MoSU027R_B03_BQ170165Ta18P030G08P005F121R1_029.ab1   453 
Contig length: old 1016, new 1016

Contig length: old 1016, new 1016
New start: 0