No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.8 (1,1:650)  625  0.00 0.00 0.00  MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1        5   651 (41)  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   (47)   647     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   694 
   59    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1    16 
   63  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   632 
   71    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1    28 
  127  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   568 
  147    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   104 
  151  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   544 
  163    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   120 
  187  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   508 
  195    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   152 
  259  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   436 
  263    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   220 
  275  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   420 
  279    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   236 
  299  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   396 
  359    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   316 
  391  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   304 
  399    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   356 
  407  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   288 
  543    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   500 
  551  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1   144 
  599    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   556 
  603  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1    92 
  635    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   592 
  639  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1    56 
  659    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   616 
  667  C MoSU027R_A11_BQ170165Ta19P005F06P030H091R1_095.ab1    28 
  675    MoSU027F_A11_BQ170165Ta19P005F06P030H091F1_095.ab1   632 
Contig length: old 735, new 735

Contig length: old 735, new 735
New start: 0