No. words: 1723; after pruning: 1683


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.3 (1,1:974)  731  0.40 0.00 0.00  MoSU026F_C09_BQ170165Ta19P030F08P005F121F1_075.ab1      117   864 (0)  C MoSU026R_C09_BQ170165Ta19P030F08P005F121R1_075.ab1   (0)   859   112 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  368 nodes

 186 str. conn. components

Path
    1    MoSU026F_C09_BQ170165Ta19P030F08P005F121F1_075.ab1     1 
  360  C MoSU026R_C09_BQ170165Ta19P030F08P005F121R1_075.ab1   616 
  364    MoSU026F_C09_BQ170165Ta19P030F08P005F121F1_075.ab1   364 
  372  C MoSU026R_C09_BQ170165Ta19P030F08P005F121R1_075.ab1   604 
  376    MoSU026F_C09_BQ170165Ta19P030F08P005F121F1_075.ab1   376 
  384  C MoSU026R_C09_BQ170165Ta19P030F08P005F121R1_075.ab1   592 
  552    MoSU026F_C09_BQ170165Ta19P030F08P005F121F1_075.ab1   552 
  556  C MoSU026R_C09_BQ170165Ta19P030F08P005F121R1_075.ab1   420 
  588    MoSU026F_C09_BQ170165Ta19P030F08P005F121F1_075.ab1   588 
  592  C MoSU026R_C09_BQ170165Ta19P030F08P005F121R1_075.ab1   384 
Contig length: old 975, new 975

Contig length: old 975, new 975
New start: 0