No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:646)  603  0.77 0.31 0.00  MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1        1   646 (51)  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   (41)   648     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   689 
   56    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1    14 
   64  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   626 
  152    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   109 
  156  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   534 
  172    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   129 
  176  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   514 
  264    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   221 
  272  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   418 
  304    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   261 
  308  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   382 
  360    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   317 
  408  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   282 
  548    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   505 
  552  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1   138 
  596    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   553 
  600  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1    90 
  608    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   565 
  612  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1    78 
  660    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   617 
  668  C MoSU027R_B11_BQ170165Ta20P005F06P030H091R1_093.ab1    22 
  676    MoSU027F_B11_BQ170165Ta20P005F06P030H091F1_093.ab1   633 
Contig length: old 739, new 740

Contig length: old 740, new 740
New start: 0