No. words: 1816; after pruning: 1776


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:1005)  767  0.12 0.74 0.12  MoSU027F_D03_BQ170165Ta20P030G08P005F121F1_025.ab1      142   949 (1)  C MoSU027R_D03_BQ170165Ta20P030G08P005F121R1_025.ab1   (0)   866    54 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  386 nodes

 195 str. conn. components

Path
    1    MoSU027F_D03_BQ170165Ta20P030G08P005F121F1_025.ab1     1 
  565  C MoSU027R_D03_BQ170165Ta20P030G08P005F121R1_025.ab1   443 
  601    MoSU027F_D03_BQ170165Ta20P030G08P005F121F1_025.ab1   601 
  605  C MoSU027R_D03_BQ170165Ta20P030G08P005F121R1_025.ab1   403 
Contig length: old 1006, new 1007

Contig length: old 1007, new 1007
New start: 0