No. words: 1395; after pruning: 1369


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:660)  635  0.00 0.15 0.00  MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1        1   661 (37)  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   (35)   662     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   697 
   50    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1    14 
   94  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   604 
  106    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1    70 
  126  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   572 
  146    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   110 
  154  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   544 
  166    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   130 
  186  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   512 
  194    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   158 
  238  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   460 
  246    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   210 
  258  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   440 
  262    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   226 
  274  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   424 
  278    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   242 
  298  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   400 
  334    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   298 
  338  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   360 
  342    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   306 
  394  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1   304 
  598    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   562 
  602  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1    96 
  658    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   622 
  666  C MoSU027R_C11_BQ170165Ta21P005F06P030H091R1_091.ab1    32 
  686    MoSU027F_C11_BQ170165Ta21P005F06P030H091F1_091.ab1   650 
Contig length: old 734, new 734

Contig length: old 734, new 734
New start: 0