No. words: 1715; after pruning: 1689


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:970)  722  0.54 0.00 0.00  MoSU026F_E09_BQ170165Ta21P030F08P005F121F1_071.ab1      109   852 (0)  C MoSU026R_E09_BQ170165Ta21P030F08P005F121R1_071.ab1   (0)   863   120 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1    MoSU026F_E09_BQ170165Ta21P030F08P005F121F1_071.ab1     1 
  321  C MoSU026R_E09_BQ170165Ta21P030F08P005F121R1_071.ab1   651 
  325    MoSU026F_E09_BQ170165Ta21P030F08P005F121F1_071.ab1   325 
  377  C MoSU026R_E09_BQ170165Ta21P030F08P005F121R1_071.ab1   595 
  417    MoSU026F_E09_BQ170165Ta21P030F08P005F121F1_071.ab1   417 
  433  C MoSU026R_E09_BQ170165Ta21P030F08P005F121R1_071.ab1   539 
  441    MoSU026F_E09_BQ170165Ta21P030F08P005F121F1_071.ab1   441 
  445  C MoSU026R_E09_BQ170165Ta21P030F08P005F121R1_071.ab1   527 
Contig length: old 971, new 971

Contig length: old 971, new 971
New start: 0