No. words: 1380; after pruning: 1354


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.4 (1,1:648)  616  0.00 0.00 0.16  MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1        5   646 (46)  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   (44)   644     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   688 
   48    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1     8 
   60  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   629 
   64    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1    24 
   92  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   597 
  100    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1    60 
  136  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   553 
  144    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   104 
  152  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   537 
  160    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   120 
  176  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   513 
  192    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   152 
  200  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   489 
  248    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   208 
  256  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   433 
  260    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   220 
  272  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   417 
  280    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   240 
  296  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   393 
  356    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   316 
  404  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   285 
  544    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   504 
  548  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1   141 
  636    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   596 
  640  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1    49 
  652    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   612 
  666  C MoSU027R_D11_BQ170165Ta22P005F06P030H091R1_089.ab1    24 
  682    MoSU027F_D11_BQ170165Ta22P005F06P030H091F1_089.ab1   642 
Contig length: old 731, new 732

Contig length: old 732, new 732
New start: 0