No. words: 1743; after pruning: 1717


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.7 (1,1:980)  749  0.13 0.00 0.00  MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1      120   881 (0)  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   (0)   862   101 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1    MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1     1 
  313  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   669 
  317    MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1   317 
  353  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   629 
  393    MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1   393 
  401  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   581 
  445    MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1   445 
  461  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   521 
  485    MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1   485 
  493  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   489 
  529    MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1   529 
  537  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   445 
  549    MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1   549 
  561  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   421 
  701    MoSU026F_F09_BQ170165Ta22P030F08P005F121F1_069.ab1   701 
  705  C MoSU026R_F09_BQ170165Ta22P030F08P005F121R1_069.ab1   277 
Contig length: old 981, new 981

Contig length: old 981, new 981
New start: 0