No. words: 1838; after pruning: 1784


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:1009)  787  0.97 0.24 0.00  MoSU027F_F03_BQ170165Ta22P030G08P005F121F1_021.ab1      141   967 (0)  C MoSU027R_F03_BQ170165Ta22P030G08P005F121R1_021.ab1   (0)   871    43 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1    MoSU027F_F03_BQ170165Ta22P030G08P005F121F1_021.ab1     1 
  419  C MoSU027R_F03_BQ170165Ta22P030G08P005F121R1_021.ab1   593 
  423    MoSU027F_F03_BQ170165Ta22P030G08P005F121F1_021.ab1   423 
  571  C MoSU027R_F03_BQ170165Ta22P030G08P005F121R1_021.ab1   441 
  611    MoSU027F_F03_BQ170165Ta22P030G08P005F121F1_021.ab1   611 
  615  C MoSU027R_F03_BQ170165Ta22P030G08P005F121R1_021.ab1   397 
Contig length: old 1010, new 1011

Contig length: old 1011, new 1011
New start: 0