No. words: 1387; after pruning: 1361


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 12.1 (1,1:652)  615  0.00 0.00 0.31  MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1        5   651 (41)  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   (47)   648     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   695 
   55    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1    12 
   79  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   617 
   91    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1    48 
   95  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   601 
  103    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1    60 
  107  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   589 
  123    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1    80 
  127  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   569 
  171    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1   128 
  175  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   521 
  303    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1   260 
  307  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   389 
  359    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1   316 
  367  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1   329 
  599    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1   556 
  603  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1    93 
  655    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1   612 
  669  C MoSU027R_E11_BQ170165Ta23P005F06P030H091R1_087.ab1    28 
  681    MoSU027F_E11_BQ170165Ta23P005F06P030H091F1_087.ab1   638 
Contig length: old 734, new 735

Contig length: old 735, new 735
New start: 0