No. words: 1702; after pruning: 1662


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:984)  707  0.14 0.00 0.00  MoSU026F_G09_BQ170165Ta23P030F08P005F121F1_067.ab1      157   873 (0)  C MoSU026R_G09_BQ170165Ta23P030F08P005F121R1_067.ab1   (0)   829   113 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1    MoSU026F_G09_BQ170165Ta23P030F08P005F121F1_067.ab1     1 
  380  C MoSU026R_G09_BQ170165Ta23P030F08P005F121R1_067.ab1   606 
  384    MoSU026F_G09_BQ170165Ta23P030F08P005F121F1_067.ab1   384 
  392  C MoSU026R_G09_BQ170165Ta23P030F08P005F121R1_067.ab1   594 
  396    MoSU026F_G09_BQ170165Ta23P030F08P005F121F1_067.ab1   396 
  400  C MoSU026R_G09_BQ170165Ta23P030F08P005F121R1_067.ab1   586 
  408    MoSU026F_G09_BQ170165Ta23P030F08P005F121F1_067.ab1   408 
  416  C MoSU026R_G09_BQ170165Ta23P030F08P005F121R1_067.ab1   570 
  428    MoSU026F_G09_BQ170165Ta23P030F08P005F121F1_067.ab1   428 
  440  C MoSU026R_G09_BQ170165Ta23P030F08P005F121R1_067.ab1   546 
  448    MoSU026F_G09_BQ170165Ta23P030F08P005F121F1_067.ab1   448 
  460  C MoSU026R_G09_BQ170165Ta23P030F08P005F121R1_067.ab1   526 
  560    MoSU026F_G09_BQ170165Ta23P030F08P005F121F1_067.ab1   560 
  568  C MoSU026R_G09_BQ170165Ta23P030F08P005F121R1_067.ab1   418 
Contig length: old 985, new 985

Contig length: old 985, new 985
New start: 0