No. words: 1708; after pruning: 1654


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:1011)  684  0.29 0.00 0.00  MoSU027F_G03_BQ170165Ta23P030G08P005F121F1_019.ab1      232   927 (0)  C MoSU027R_G03_BQ170165Ta23P030G08P005F121R1_019.ab1   (0)   781    86 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1    MoSU027F_G03_BQ170165Ta23P030G08P005F121F1_019.ab1     1 
  571  C MoSU027R_G03_BQ170165Ta23P030G08P005F121R1_019.ab1   442 
  575    MoSU027F_G03_BQ170165Ta23P030G08P005F121F1_019.ab1   575 
  587  C MoSU027R_G03_BQ170165Ta23P030G08P005F121R1_019.ab1   426 
  591    MoSU027F_G03_BQ170165Ta23P030G08P005F121F1_019.ab1   591 
  595  C MoSU027R_G03_BQ170165Ta23P030G08P005F121R1_019.ab1   418 
  599    MoSU027F_G03_BQ170165Ta23P030G08P005F121F1_019.ab1   599 
  607  C MoSU027R_G03_BQ170165Ta23P030G08P005F121R1_019.ab1   406 
  611    MoSU027F_G03_BQ170165Ta23P030G08P005F121F1_019.ab1   611 
  643  C MoSU027R_G03_BQ170165Ta23P030G08P005F121R1_019.ab1   370 
  659    MoSU027F_G03_BQ170165Ta23P030G08P005F121F1_019.ab1   659 
  671  C MoSU027R_G03_BQ170165Ta23P030G08P005F121R1_019.ab1   342 
Contig length: old 1012, new 1012

Contig length: old 1012, new 1012
New start: 0